Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888399.1_cds_XP_016442969.1_38178
CDS Infomation

[gene=LOC107768362] [db_xref=GeneID:107768362] [protein=shikimate O-hydroxycinnamoyltransferase-like] [protein_id=XP_016442969.1] [location=join(54750..55175,58221..59105)] [gbkey=CDS]
Sequence

ATGGGAAGTGAAAAAATCATGAAGATTAACATCAAGGAATCAACATTAGTAAAACCATCA
AAACCAACACCAACAAAAAGACTTTGGAGTTCTAACTTAGATTTAATAGTGGGAAGAATT
CATCTTTTAACAGTATATTTCTATAAACCAAATGGATCTTCAAATTTCTTTGATTCAAAA
ATAATGAAAGAAGCATTAAGTAATGTTCTTGTTTCATTTTACCCAATGGCTGGAAGATTA
GCTAGAGATGAACAAGGAAGAATTGAGATAAATTGTAATGGAGAAGGAGTTTTATTTGTT
GAAGCTGAAAGTGATGCTTTTGTTGATGATTTTGGTGATTTTACTCCAAGTTTGGAACTT
AGGAAACTTATTCCTACTGTTGACACTTCTGGTGATATTTCTACTTTCCCCCTCATCATC
TTTCAGGTTACTCGTTTCAAATGTGGTGGAGTTTCACTTGGTGGAGGAGTATTCCACACT
TTATCAGATGGTCTCTCATCAATTCACTTCATCAACACATGGTCCGATATAGCCCGAGGC
CTCTCCGTCGCCATCCCGCCGTTCATCGACCGGACCCTCCTCCGTGCACGGGACCCACCA
ACATCGTCTTTCGAGCACGTCGAGTATCATCCTCCTCCATCTCTAATTTCATCATCAAAA
ACCCTAGAATCCACAAGCCCAAAGCCTAGTATGACAACCATGTTAAAATTCTCTAGTGAC
CAACTTGGGCTTTTAAAGTCCAAGTCCAAACATGAAGGTAGCACATACGAAATCCTCGCG
GCCCATATTTGGCGTTGCACGTGCAAAGCACGTGCACTAGCCGACGATCAATTGACCAAA
TTACATGTTGCCACTGATGGTAGGTCTAGGCTTTGTCCTCCTTTACCACCAGGTTACTTG
GGAAATGTTGTGTTCACAGCTACACCGATGGCAAAATCAAGTGAACTTTTACAAGAACCA
TTGACAAATTCAGCTAAGAGAATTCATACTTCATTGTCAAAAATGGATGATAATTACCTA
AGATCAGCGCTCGATTACCTCGAATTACAGCCCGATTTATCGGCTTTAATCCGTGGCCCG
ACATACTTTGCTAGCCCTAATCTTAATATTAATAGTTGGACTAGATTGCCTGTTCATGAT
TCAGATTTTGGATGGGGAAGACCAATTCATATGGGACCAGCTTGCATTTTATATGAAGGG
ACAGTTTATATATTACCAAGTCCAAATAGTAAAGATAGAAACTTACGTTTGGCTGTTTGT
TTAGATGCTGATCATATGCCACTATTTGAGAAGTATTTGTATGAATTTTGA

Peptide Sequence

PEP ID

XP_016442969.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Nicotiana tabacum]
Sequence

MGSEKIMKINIKESTLVKPSKPTPTKRLWSSNLDLIVGRIHLLTVYFYKPNGSSNFFDSK
IMKEALSNVLVSFYPMAGRLARDEQGRIEINCNGEGVLFVEAESDAFVDDFGDFTPSLEL
RKLIPTVDTSGDISTFPLIIFQVTRFKCGGVSLGGGVFHTLSDGLSSIHFINTWSDIARG
LSVAIPPFIDRTLLRARDPPTSSFEHVEYHPPPSLISSSKTLESTSPKPSMTTMLKFSSD
QLGLLKSKSKHEGSTYEILAAHIWRCTCKARALADDQLTKLHVATDGRSRLCPPLPPGYL
GNVVFTATPMAKSSELLQEPLTNSAKRIHTSLSKMDDNYLRSALDYLELQPDLSALIRGP
TYFASPNLNINSWTRLPVHDSDFGWGRPIHMGPACILYEGTVYILPSPNSKDRNLRLAVC
LDADHMPLFEKYLYEF

Transcript Sequence

Gene sequence data has not been registered.